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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
21.5
nTPM
HPA Brain:
5.3
nTPM
GTEx:
21.5
nTPM
FANTOM5:
47.6
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
5.3
Sample id
Sample description
nTPM
Amygdala nTPM: 5.3
2517
Female, age 94, left hemisphere
6.5
2695
Female, age 67, right hemisphere
6.0
2814
Male, age 76, right hemisphere
5.2
1987
Female, age 91, left hemisphere
5.1
2514
Male, age 75, right hemisphere
3.7
Basal amygdala nTPM: 4.3
2243
Female, age 91, right hemisphere
5.6
2110
Male, age 80, left hemisphere
5.5
2609
Male, age 75, right hemisphere
4.6
2685
Female, age 94, left hemisphere
4.6
1955
Male, age 76, both hemispheres
3.5
2827
Female, age 67, right hemisphere
1.7
Central amygdala nTPM: 5.0
2826
Female, age 94, left hemisphere
6.4
1905
Male, age 76, both hemispheres
5.8
2239
Male, age 80, left hemisphere
5.3
2515
Male, age 75, right hemisphere
4.2
2701
Female, age 91, right hemisphere
3.6
Corticomedial amygdala nTPM: 5.3
2829
Male, age 80, left hemisphere
9.3
2429
Female, age 94, left hemisphere
6.4
2242
Female, age 91, right hemisphere
5.5
2240
Male, age 76, both hemispheres
4.5
2428
Male, age 75, right hemisphere
3.3
2535
Female, age 67, right hemisphere
3.2
Lateral amygdala nTPM: 4.9
2534
Female, age 94, left hemisphere
7.2
1883
Male, age 76, both hemispheres
5.6
2516
Male, age 75, right hemisphere
5.4
2255
Female, age 91, right hemisphere
4.6
2256
Male, age 80, left hemisphere
3.2
2830
Female, age 67, right hemisphere
3.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
21.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 21.5
Samples: 152
Max nTPM: 54.7
Min nTPM: 0.0
Std nTPM: 11.5
Median nTPM: 19.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
54.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
53.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
52.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
51.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
49.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
48.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
48.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
46.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
46.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
41.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
41.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
40.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
38.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
38.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
37.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
37.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
37.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
37.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
35.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
35.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
34.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
34.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
33.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
33.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
32.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
32.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
31.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
31.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
31.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
30.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
29.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
29.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
29.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
29.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
29.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
29.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
28.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
28.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
28.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
28.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
27.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
26.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
26.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
26.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
25.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
25.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
25.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
25.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
24.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
24.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
24.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
24.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
24.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
24.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
23.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
23.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
22.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
22.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
22.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
22.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
22.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
22.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
21.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
21.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
21.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
21.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
21.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
20.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
20.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
20.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
20.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
19.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
19.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
19.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
19.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
19.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
19.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
19.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
18.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
18.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
18.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
18.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
18.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
17.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
17.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
17.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
17.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
17.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
17.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
17.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
17.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
16.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
16.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
16.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
16.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
16.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
16.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
15.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
15.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
15.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
15.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
14.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
14.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
14.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
14.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
14.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
14.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
14.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
14.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
14.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
14.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
13.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
13.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
13.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
12.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
12.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
12.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
12.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
12.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
11.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
11.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
11.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
11.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
11.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
11.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
10.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
10.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
10.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
10.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
10.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
10.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
9.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
8.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
8.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
8.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
8.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
8.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
7.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
7.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
7.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
7.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
7.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
7.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
6.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
6.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
6.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
6.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
5.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
5.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
3.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
0.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.