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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
317.4
nTPM
HPA Brain:
825.2
nTPM
GTEx:
317.4
nTPM
FANTOM5:
1009.5
Scaled Tags Per Million
Pig:
129.1
nTPM
Mouse:
323.0
nTPM
Allen mouse:
16.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
825.2
Sample id
Sample description
nTPM
Amygdala nTPM: 487.2
2517
Female, age 94, left hemisphere
615.4
2514
Male, age 75, right hemisphere
550.8
1987
Female, age 91, left hemisphere
532.7
2814
Male, age 76, right hemisphere
386.5
2695
Female, age 67, right hemisphere
350.3
Basal amygdala nTPM: 825.2
2243
Female, age 91, right hemisphere
1065.8
2827
Female, age 67, right hemisphere
963.1
2110
Male, age 80, left hemisphere
845.8
2685
Female, age 94, left hemisphere
831.3
2609
Male, age 75, right hemisphere
740.1
1955
Male, age 76, both hemispheres
505.2
Central amygdala nTPM: 635.6
2826
Female, age 94, left hemisphere
922.9
2239
Male, age 80, left hemisphere
867.6
2515
Male, age 75, right hemisphere
583.9
2701
Female, age 91, right hemisphere
465.9
1905
Male, age 76, both hemispheres
337.6
Corticomedial amygdala nTPM: 810.0
2829
Male, age 80, left hemisphere
1014.2
2535
Female, age 67, right hemisphere
965.8
2242
Female, age 91, right hemisphere
874.5
2429
Female, age 94, left hemisphere
735.7
2428
Male, age 75, right hemisphere
721.7
2240
Male, age 76, both hemispheres
547.9
Lateral amygdala nTPM: 693.2
2534
Female, age 94, left hemisphere
971.7
2256
Male, age 80, left hemisphere
813.1
2830
Female, age 67, right hemisphere
762.7
2255
Female, age 91, right hemisphere
656.6
2516
Male, age 75, right hemisphere
523.6
1883
Male, age 76, both hemispheres
431.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
317.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 317.4
Samples: 152
Max nTPM: 997.7
Min nTPM: 20.2
Std nTPM: 168.0
Median nTPM: 275.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
997.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
912.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
745.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
712.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
646.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
635.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
607.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
607.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
603.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
603.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
599.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
556.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
544.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
540.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
539.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
539.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
531.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
531.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
527.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
515.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
511.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
510.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
509.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
505.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
499.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
495.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
494.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
492.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
489.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
483.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
483.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
479.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
457.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
457.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
456.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
443.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
442.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
431.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
415.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
405.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
401.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
397.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
396.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
395.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
395.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
392.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
382.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
372.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
361.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
356.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
355.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
354.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
345.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
344.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
343.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
338.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
333.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
333.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
332.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
326.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
321.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
318.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
317.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
305.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
302.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
300.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
300.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
294.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
294.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
294.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
292.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
287.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
286.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
281.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
280.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
276.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
274.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
272.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
270.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
269.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
266.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
264.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
259.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
259.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
257.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
256.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
252.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
249.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
248.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
246.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
242.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
241.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
236.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
235.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
233.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
233.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
228.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
226.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
226.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
225.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
220.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
216.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
213.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
211.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
211.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
208.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
207.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
207.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
205.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
204.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
204.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
197.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
194.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
192.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
189.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
186.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
186.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
185.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
184.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
184.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
183.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
174.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
172.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
171.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
165.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
164.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
163.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
159.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
158.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
154.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
154.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
153.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
151.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
151.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
149.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
148.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
148.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
133.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
131.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
131.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
129.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
126.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
123.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
117.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
116.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
111.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
108.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
106.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
68.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
67.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
67.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
20.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
323.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 323.0
Samples: 4
Max nTPM: 328.4
Min nTPM: 314.5
Sample A
Male
314.5
Sample B
Male
328.4
Sample C
Female
324.1
Sample D
Female
324.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.