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To cite us, please use:
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Berglund L et al
A gene-centric human protein atlas for expression profiles based on antibodies.
Mol Cell Proteomics 2008 (10):2019-27.
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Uhlen M et al
A Human Protein Atlas for Normal and Cancer Tissues Based on Antibody Proteomics
Mol Cell Proteomics 2005 4(12):1920-1932.
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Nilsson P et al
Towards a human proteome atlas: High-throughput generation of mono-specific antibodies for tissue profiling
Proteomics 2005 5(17):4327-37.
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Pontén F et al
The Human Protein Atlas - a tool for pathology.
J Pathology 2008 216(4):387-93.
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| 70 |
Pontén F, Gry M, Fagerberg L, Lundberg E, Asplund A, Berglund L, Oksvold P, Björling E, Hober S, Kampf C, Navani S, Nilsson P, Ottosson J, Persson A, Wernérus H, Wester K, Uhlén M
A global view of protein expression in human cells, tissues, and organs.
Mol Syst Biol 2009 5:337.
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| 69 |
Rockberg J, Uhlén M.
Prediction of antibody response using recombinant human protein fragments as antigen.
Protein Sci. 2009 16;18(11):2346-2355.
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| 68 |
Rodriguez H, Snyder M, Uhlén M, Andrews P, Beavis R, Borchers C, Chalkley RJ, Cho SY, Cottingham K, Dunn M, Dylag T, Edgar R, Hare P, Heck AJ, Hirsch RF, Kennedy K, Kolar P, Kraus HJ, Mallick P, Nesvizhskii A, Ping P, Pontén F, Yang L, Yates JR, Stein SE, Hermjakob H, Kinsinger CR, Apweiler R.
Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: The Amsterdam Principles.
J Proteome Res 2009 E-pub ahead of print
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| 67 |
Alimohammadi M, Dubois N, Sköldberg F, Hallgren A, Tardivel I, Hedstrand H, Haavik J, Husebye ES, Gustafsson J, Rorsman F, Meloni A, Janson C, Vialettes B, Kajosaari M, Egner W, Sargur R, Pontén F, Amoura Z, Grimfeld A, De Luca F, Betterle C, Perheentupa J, Kämpe O, Carel JC.
Pulmonary autoimmunity as a feature of autoimmune polyendocrine syndrome type 1 and identification of KCNRG as a bronchial autoantigen.
Proc Natl Acad Sci U S A 2009 106(11):4396-401.
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| 66 |
Leja J, Essaghir A, Essand M, Wester K, Oberg K, Tötterman TH, Lloyd R, Vasmatzis G, Demoulin JB, Giandomenico V.
Novel markers for enterochromaffin cells and gastrointestinal neuroendocrine carcinomas.
Mod Pathol 2009 22(2):261-72.
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| 65 |
Stromberg S, Agnarsdottir MT, Magnusson K, Rexhepaj E, Bolander S, Lundberg E, Asplund A, Ryan D, Rafferty M, Gallagher W, Uhlen M, Bergqvist M, Ponten F.
Selective expression of Syntaxin-7 protein in benign melanocytes and malignant melanoma.
J Proteome Res 2009 E-pub ahead of print
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| 64 |
Qu M, Aronica E, Boer K, Fällmar D, Kumlien E, Nistér M, Wester K, Pontén F, Smits A.
DLG3/SAP102 protein expression in malformations of cortical development: a study of human epileptic cortex by tissue microarray.
Epilepsy Res 2009 84(1):33-41.
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| 63 |
Estigoy CB, Pontén F, Odeberg J, Herbert B, Guilhaus M, Charleston M, Ho JWK, Cameron D, dos Remedios CG.
Intercalated discs: multiple proteins perform multiple functions in non-failing and failing human hearts.
Biophys Rev 2009 1:43–49.
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| 62 |
Mulder J, Björling E, Jonasson K, Wernérus H, Hober S, Hökfelt T, Uhlén M.
Tissue profiling of the mammalian central nervous system using human antibody-based proteomics.
Mol Cell Proteomics 2009 E-pub ahead of print
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| 61 |
Larsson, K., Eriksson, C., Schwenk, J. M., Berglund, L., Wester, K., Uhlen, M., Hober, S., Wernerus, H.
Characterization of PrEST-based antibodies towards human Cytokeratin-17.
J Immunol Methods 2009 342:20-32.
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| 60 |
Steen, J., Ramström, M., Uhlén, M., Hober, S., Ottosson, J.
Automated sample preparation method for mass spectrometry analysis on recombinant proteins.
J Chromatogr A 2009 1216(20):4457-4464.
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| 59 |
Bolander A, Agnarsdóttir M, Strömberg S, Ponten F, Hesselius P, Uhlen M, Bergqvist M.
The protein expression of TRP-1 and galectin-1 in cutaneous malignant melanomas.
Cancer Genomics Proteomics 2008 5(6):293-300.
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| 58 |
Wensman H, Göransson H, Leuchowius KJ, Strömberg S, Pontén F, Isaksson A, Rutteman GR, Heldin NE, Pejler G, Hellmén E.
Extensive expression of craniofacial related homeobox genes in canine mammary sarcomas.
Breast Cancer Res Treat 2008 E-pub ahead of print
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| 57 |
Borgquist S, Djerbi S, Pontén F, Anagnostaki L, Goldman M, Gaber A, Manjer J, Landberg G, Jirström K.
HMG-CoA reductase expression in breast cancer is associated with a less aggressive phenotype and influenced by anthropometric factors.
Int J Cancer 2008 123(5):1146-53.
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| 56 |
Borgquist S, Jögi A, Pontén F, Rydén L, Brennan DJ, Jirström K.
Prognostic impact of tumour-specific HMG-CoA reductase expression in primary breast cancer.
Breast Cancer Res 2008 10(5):R79.
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| 55 |
Asplund A, Gry Björklund M, Sundquist C, Strömberg S, Edlund K, Ostman A, Nilsson P, Pontén F, Lundeberg J.
Expression profiling of microdissected cell populations selected from basal cells in normal epidermis and basal cell carcinoma.
Br J Dermatol 2008 158(3):527-38.
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| 54 |
Uhlen M.
A new era for proteomics research?
Genome Biol. 2008 4;9(11):325.
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| 53 |
Uhlen M, Gräslund S, Sundström M.
A pilot project to generate affinity reagents to human proteins.
Nature Methods 2008 5(10):854-5.
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| 52 |
Pontén F, Jirström K, Uhlen M.
The Human Protein Atlas - a tool for pathology.
J Pathology 2008 216(4):387-93.
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| 51 |
Rockberg J, Löfblom J, Hjelm B, Uhlén M, Ståhl S.
Epitope mapping of antibodies using bacterial surface display.
Nature Methods 2008 5(12):1039-45.
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| 50 |
Tegel H, Steen J, Konrad A, Nikdin H, Pettersson K, Stenvall M, Tourle S, Wrethagen U, Xu L, Yderland L, Uhlén M, Hober S, Ottosson J
High-throughput protein production - Lessons from
scaling up from 10 to 288 recombinant proteins per week
Biotechnology Journal 2008 4(1):51-57.
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| 49 |
Berglund L, Björling E, Oksvold P, Fagerberg L, Asplund A, Al-Khalili Szigyarto C, Persson A, Ottosson J, Wernérus H, Nilsson P, Lundberg E, Sivertsson, A, Navani S, Wester K, Kampf C, Hober S, Pontén F, Uhlén M.
A gene-centric human protein atlas for expression profiles based on antibodies.
Mol Cell Proteomics 2008 (10):2019-27.
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| 48 |
Björling E, Uhlen M.
Antibodypedia - a portal for sharing antibody and antigen validation data.
Mol Cell Proteomics 2008 7(10):2028-37.
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| 47 |
Uhlén M, Hober S.
Generation and validation of affinity reagents on a proteome-wide level.
J Mol Recognit 2008 Epub ahead of print
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| 46 |
Lundberg E, Gry M, Oksvold P, Kononen J, Andersson-Svahn H, Pontén F, Uhlén M, Asplund A.
The correlation between cellular size and protein expression levels - Normalization for global protein profiling.
J Proteomics 2008 16(5):493-502.
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| 45 |
Ramström, M., Zuberovic, A., Grönwall, C., Hanrieder, J., Bergquist, J. & Hober, S.
Development of Affinity Columns for the Removal of High-Abundant Proteins in Cerebrospinal Fluid
Biotechn Appl Biochem 2008 Epub ahead of print
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| 44 |
Dana-Lynn T. Koomoa, Ramon Christopher V. Go, Kenneth Wester, André S. Bachmann
Expression profile of PRAF2 in the human brain and enrichment in synaptic vesicles
Neurosci Lett 2008 436(2):171-6.
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| 43 |
Schwenk JM, Gry M, Rimini R, Uhlén M, Nilsson P.
Antibody Suspension Bead Arrays within Serum Proteomics.
J Proteome Res 2008 7(8):3168-79.
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| 42 |
Berglund L, Björling E, Jonasson K, Rockberg J, Fagerberg L, Al-Khalili Szigyarto C, Sivertsson A, Uhlén M.
A whole-genome bioinformatics approach to selection of antigens for systematic antibody generation.
Proteomics 2008 8(14):2832-9.
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| 41 |
Uhlen M
Affinity as a tool in life science
Biotechniques 2008 44: S649-S654.
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| 40 |
Paavilainen, L, Wernérus H, Nilsson P, Uhlén M, Hober S, Wester K, Pontén F.
Evaluation of mono-specific antibodies: A comparison study with commercial analogues using immunohistochemistry on tissue microarrays
Appl Immunohistochem Mol Morphol 2008 16(5):493-502.
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| 39 |
Berglund L, Andrade J, Odeberg J, Uhlén M.
The epitope space of the human proteome.
Protein Sci 2008 17(4):606-13.
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| 38 |
Barbe L, Lundberg E, Oksvold P, Stenius A, Lewin E, Björling E, Asplund A, Pontén F, Brismar H, Uhlén M, Andersson-Svahn H.
Toward a confocal subcellular atlas of the human proteome.
Mol Cell Proteomics 2008 7(3):499-508.
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| 37 |
Björling E, Lindskog C, Oksvold P, Linné J, Kampf C, Hober S, Uhlen M, Ponten F.
A web-based tool for in silico biomarker discovery based on tissue-specific protein profiles in normal and cancer tissues.
Mol Cell Proteomics 2008 7(5): 825-44.
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| 36 |
Hober S and Uhlén M.
Human protein atlas and the use of microarray technologies.
Curr Opin Biotechnol 2008 19(1):30-5.
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| 35 |
Mathivanan et al.
Human Proteinpedia enables sharing of human protein data
Nature Biotechnol 2008 26(2):164-7.
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| 34 |
Sundqvist, G., Stenvall, M., Berglund, H., Ottosson, J., Brumer, H.
A general, robust method for the quality control of intact proteins using LC-ESI-MS.
Journal of Chromatography, B: Analytical Technologies in the Biomedical and Life Sciences 2007 852(1-2):188-194.
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| 33 |
Alm, T., Steen, J., Ottosson, J., Hober, S.
High-throughput protein purification under denaturating conditions by the use of cation exchange chromatography.
Biotechnology Journal 2007 2(6):709-716.
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| 32 |
Renberg B, Nordin J, Merca A, Uhlen M, Feldwisch J, Nygren PA, Karlstrom AE.
Affibody Molecules in Protein Capture Microarrays: Evaluation of Multidomain - Ligands and Different Detection Formats.
J Proteome Res 2007 6(1):171-179.
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| 31 |
Mulder, Wernerus, Shi, Ponten, Hober, Uhlen and Hökfelt
High-throughput screening of systematic generated antibodies against human gene products in the rat nervous system
Neuroscience 2007 8;146(4):1689-703.
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| 30 |
Orchard, S., Heck, A., Uhlen, M. and Ping, P
Orchard, S., Heck, A., Uhlen, M. and Ping, P. (2007). Publication Committee meeting. HUPO 5th annual World Congress. Long Beach, CA, USA 30 October 2006
Proteomics 2007 7(7):1009-11.
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| 29 |
Falk, R., Ramström, M., Ståhl, S. & Hober, S.
Approaches for Systematic Proteome Exploration
Biomolecular Engineering 2007 24, 155-168.
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| 28 |
Strömberg S, Björklund MG, Asplund C, Sköllermo A, Persson A, Wester K, Kampf C, Nilsson P, Andersson AC, Uhlen M, Kononen J, Ponten F, Asplund A.
A high-throughput strategy for protein profiling in cell microarrays using automated image analysis.
Proteomics 2007 7(13):2142-50.
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| 27 |
Uhlen M.
Mapping the human proteome using antibodies
Mol Cell Proteomics 2007 6(8):1455-6.
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| 26 |
Bengtsson S, Krogh M, Szigyarto CA, Uhlen M, Schedvins K, Silfversward C, Linder S, Auer G, Alaiya A, James P.
Large-Scale Proteomics Analysis of Human Ovarian Cancer for Biomarkers.
J Proteome Res 2007 6(4):1440-1450.
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| 25 |
Lofblom J, Kronqvist N, Uhlen M, Stahl S, Wernerus H.
Optimization of electroporation-mediated transformation: Staphylococcus carnosus as model organism.
J Appl Microbiol 2007 102(3):736-47.
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| 24 |
Lerner M, Corcoran M, Cepeda D, Nielsen ML, Zubarev R, Ponten F, Uhlen M, Hober S, Grander D, Sangfelt O.
The RBCC Gene RFP2 (Leu5) Encodes a Novel Transmembrane E3 Ubiquitin Ligase Involved in ERAD.
Mol Biol Cell 2007 Epub ahead of print
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| 23 |
Lundberg E, Sundberg M, Graslund T, Uhlen M, Andersson Svahn H.
A novel method for reproducible fluorescent labeling of small amounts of antibodies on solid phase.
J Immunol Methods 2007 322(1-2):40-9.
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| 22 |
Patrakka J, Xiao Z, Nukui M, Takemoto M, He L, Oddsson A, Perisic L, Kaukinen A, Szigyarto CA, Uhlen M, Jalanko H, Betsholtz C, Tryggvason K.
Expression and subcellular distribution of novel glomerulus-associated proteins dendrin, ehd3, sh2d4a, plekhh2, and 2310066E14Rik.
J Am Soc Nephrol 2007 18(3):689-97.
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| 21 |
Taussig MJ, Stoevesandt O, Borrebaeck CA, Bradbury AR, Cahill D, Cambillau C, de Daruvar A, Dubel S, Eichler J, Frank R, Gibson TJ, Gloriam D, Gold L, Herberg FW, Hermjakob H, Hoheisel JD, Joos TO, Kallioniemi O, Koegll M, Konthur Z, Korn B, Kremmer E, Krobitsch S, Landegren U, van der Maarel S, McCafferty J, Muyldermans S, Nygren PA, Palcy S, Pluckthun A, Polic B, Przybylski M, Saviranta P, Sawyer A, Sherman DJ, Skerra A, Templin M, Ueffing M, Uhlen M.
ProteomeBinders: planning a European resource of affinity reagents for analysis of the human proteome.
Nature Methods 2007 4(1):13-7.
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| 20 |
Schwenk JM, Lindberg J, Sundberg M, Uhlen M, Nilsson P.
Determination of Binding Specificities in Highly Multiplexed Bead-based Assays for Antibody Proteomics.
Mol Cell Proteomics 2007 6(1):125-132.
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| 19 |
Steen, J., Uhlen, M., Hober, S., Ottosson, J.
High-throughput protein purification using an automated set-up for high-yield affinity chromatography.
Protein Expression and Purification 2006 46(2):173-178.
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| 18 |
Andrade, Berglund, Uhlen and Odeberg
Using Grid Technology for Computationally Intensive Applied Bioinformatics Analyses.
In Silico Biology 2006 495-504.
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| 17 |
Persson A, Hober S, Uhlen M.
A human protein atlas based on antibody proteomics.
Curr Opin Mol Ther 2006 8(3):185-90.
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| 16 |
Ek S, Andreasson U, Hober S, Kampf C, Ponten F, Uhlen M, Merz H, Borrebaeck CA.
From gene expression analysis to tissue microarrays: a rational approach to identify therapeutic and diagnostic targets in lymphoid malignancies.
Mol Cell Proteomics 2006 5(6):1072-81.
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| 15 |
Eriksson C, Agaton C, Kange R, Sundberg M, Nilsson P, Ek B, Uhlen M, Gustafsson M, Hober S.
Microfluidic analysis of antibody specificity in a compact disk format.
J Proteome Res 2006 5(7):1568-74.
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| 14 |
Haab BB, Paulovich AG, Anderson NL, Clark AM, Downing GJ, Hermjakob H, Labaer J, Uhlen M.
A reagent resource to identify proteins and peptides of interest for the cancer community: a workshop report.
Mol Cell Proteomics 2006 5(10):1996-2007.
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| 13 |
Larsson K, Wester K, Nilsson P, Uhlen M, Hober S, Wernerus H.
Multiplexed PrEST immunization for high-throughput affinity proteomics.
J Immunol Methods 2006 315(1-2):110-20.
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| 12 |
Andersson AC, Stromberg S, Backvall H, Kampf C, Uhlen M, Wester K, Ponten F.
Analysis of protein expression in cell microarrays: a tool for antibody-based proteomics.
J Histochem Cytochem 2006 54(12):1413-23.
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| 11 |
Janzi M, Odling J, Pan-Hammarstrom Q, Sundberg M, Lundeberg J, Uhlen M, Hammarstrom L, Nilsson P.
Serum Microarrays for Large Scale Screening of Protein Levels
Mol Cell Proteomics 2005 4(12):1942-1947.
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| 10 |
Nilsson P, Paavilainen L, Larsson K, Odling J, Sundberg M, Andersson AC, Kampf C, Persson A, Szigyarto CA, Ottosson J, Bjorling E, Hober S, Wernerus H, Wester K, Ponten F, Uhlen M.
Towards a human proteome atlas: High-throughput generation of mono-specific antibodies for tissue profiling
Proteomics 2005 5(17):4327-37.
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| 9 |
Hedhammar M, Stenvall M, Lonneborg R, Nord O, Sjolin O, Brismar H, Uhlen M, Ottosson J, Hober S.
A novel flow cytometry-based method for analysis of expression levels in Escherichia coli, giving information about precipitated and soluble protein
J Biotechnol. 2005 23;119(2):133-46.
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| 8 |
Stenvall M, Steen J, Uhlen M, Hober S, Ottosson J.
High-throughput solubility assay for purified recombinant protein immunogens
Biochim Biophys Acta 2005 31;1752(1):6-10.
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| 7 |
Uhlen M, Bjorling E, Agaton C, Szigyarto CA, Amini B, Andersen E, Andersson AC, Angelidou P, Asplund A, Asplund C, Berglund L, Bergstrom K, Brumer H, Cerjan D, Ekstrom M, Elobeid A, Eriksson C, Fagerberg L, Falk R, Fall J, Forsberg M, Bjorklund MG, Gumbel K, Halimi A, Hallin I, Hamsten C, Hansson M, Hedhammar M, Hercules G, Kampf C, Larsson K, Lindskog M, Lodewyckx W, Lund J, Lundeberg J, Magnusson K, Malm E, Nilsson P, Odling J, Oksvold P, Olsson I, Oster E, Ottosson J, Paavilainen L, Persson A, Rimini R, Rockberg J, Runeson M, Sivertsson A, Skollermo A, Steen J, Stenvall M, Sterky F, Stromberg S, Sundberg M, Tegel H, Tourle S, Wahlund E, Walden A, Wan J, Wernerus H, Westberg J, Wester K, Wrethagen U, Xu LL, Hober S, Ponten F.
A Human Protein Atlas for Normal and Cancer Tissues Based on Antibody Proteomics
Mol Cell Proteomics 2005 4(12):1920-1932.
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| 6 |
Lindskog M, Rockberg J, Uhlen M, Sterky F.
Selection of protein epitopes for antibody production
Biotechniques 2005 38(5):723-7.
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| 5 |
Uhlen M, Ponten F.
Antibody-based proteomics for human tissue profiling
Mol Cell Proteomics 2005 4(4):384-93.
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| 4 |
Kampf C, Andersson A-C, Wester K, Björling E, Uhlen M, Ponten F
Antibody-based tissue profiling as a tool in clinical proteomics
Clin. Proteomics 2004 1(3-4):285-300.
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| 3 |
Agaton C, Uhlen M, Hober S.
Genome-based proteomics
Electrophoresis 2004 25(9):1280-8.
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| 2 |
Agaton C, Falk R, Hoiden Guthenberg I, Gostring L, Uhlen M, Hober S.
Selective enrichment of monospecific polyclonal antibodies for antibody-based proteomics efforts.
J Chromatogr A 2004 16;1043(1):33-40.
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| 1 |
Agaton, C., J. Galli, I. Hoiden Guthenberg, L. Janzon, M. Hansson, A. Asplund, E. Brundell, S. Lindberg, I. Ruthberg, K. Wester, D. Wurtz, C. Hoog, J. Lundeberg, S. Stahl, F. Ponten, and M. Uhlen
Affinity proteomics for systematic protein profiling of chromosome 21 gene products in human tissues.
Mol Cell Proteomics 2003 2(6):405-14.
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